Job Description P39406 Confidence 99.76% Date Thu Jan 5 12:00:42 GMT 2012 Rank 74 Aligned Residues 139 % Identity 18% Template c2pwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase Resolution 1.70 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																																		.	.	.	.
Query SS confidence																																			.																																		.	.	.	.
Query Sequence		S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	.	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	.	.	.	.	A	S	N	V	F	S	E	V	K
Query Conservation																																			.																																		.	.	.	.
Alig confidence																																			.																																		.	.	.	.
Template Conservation
Template Sequence		A	S	A	M	V	T	L	L	D	L	A	P	G	M	R	V	L	E	A	G	T	G	S	G	G	L	T	L	F	L	A	R	A	V	G	E	K	G	L	V	E	S	Y	E	A	R	P	H	H	L	A	Q	A	E	R	N	V	R	A	F	W	Q	V	E	N	V	R	F	H	L	G	K	L	E	E	A	E	L	E	E
Template Known Secondary structure									T	T			T	T									T	T	S											T	T	T	S							S																										S		G	G	G					T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R	A	I	M	T	R	Q
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Template Sequence		A	A	Y	D	G	V	A	L	D	L	M	E	P	W	.	.	.	.	.	.	.	.	.	.	K	V	L	E	K	A	A	L	A	L	K	P	D	R	F	L	V	A	.	.	.	.	Y	L	P	N	I	T	Q	V	L	E	L	V	R	A	A	.	.	.	.	E	A	H	P	F	R	L	E	R	V	L	E	V	G	W
Template Known Secondary structure		T									S	S		G	G	.	.	.	.	.	.	.	.	.	.	G	G																	.	.	.	.			S												G	.	.	.	.	G	G	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																			.	.	.	.																.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.											.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		224	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions