Job Description P39406 Confidence 99.14% Date Thu Jan 5 12:00:42 GMT 2012 Rank 275 Aligned Residues 144 % Identity 14% Template c2plwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna methyltransferase, putative; PDBTitle: crystal structure of a ribosomal rna methyltransferase, putative, from2 plasmodium falciparum (pf13_0052). Resolution 1.70 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																									.	.														.	.	.	.																											.	.
Query SS confidence																									.	.														.	.	.	.																											.	.
Query Sequence		H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	.	.	S	P	K	I	R	L	T	L	C	D	V	S	A	.	.	.	.	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	.	.	E	V	K	G	R	F	D	M	I	I
Query Conservation																									.	.														.	.	.	.																											.	.
Alig confidence																									.	.														.	.	.	.																											.	.
Template Conservation
Template Sequence		K	K	N	K	I	I	L	D	I	G	C	Y	P	G	S	W	C	Q	V	I	L	E	R	T	K	N	Y	K	N	K	I	I	G	I	D	K	K	I	M	D	P	I	P	N	V	Y	F	I	Q	G	E	I	G	K	D	N	M	N	N	I	N	S	V	D	Y	K	L	K	E	I	L	Q	D	K	K	I	D	I	I	L
Template Known Secondary structure			T	T							S		T	T											T	T	T	S									S	S						T	T								T	T	T	T	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		267	.	.	270	.	.	.	.	.							.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																																						.	.	.																.	.
Query SS confidence											.	.	.	.	.	.																																						.	.	.																.	.
Query Sequence		S	N	P	P	F	H	D	G	M	.	.	.	.	.	.	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	.	.	.	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	.	.	R	F	K	V	Y	R	A	I
Query Conservation											.	.	.	.	.	.																																						.	.	.																.	.
Alig confidence											.	.	.	.	.	.																																						.	.	.																.	.
Template Conservation
Template Sequence		S	D	A	A	V	P	C	I	G	N	K	I	D	D	H	L	N	S	C	E	L	T	L	S	I	T	H	F	M	E	Q	Y	I	N	I	G	G	T	Y	I	V	K	M	Y	L	G	S	Q	T	N	N	L	K	T	Y	L	K	G	M	F	Q	L	V	H	T	T	K	P	K	S	R	E	I	Y	L	V	C	K	N	F
Template Known Secondary structure										S																																					S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		336	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions