|   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 250 | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
S | Q | L | L | L | S | T | L | T | P | H | T | K | G | K | V | L | D | V | G | C | G | A | G | V | L | S | V | A | F | A | R | H | S | P | K | I | R | L | T | L | C | D | V | S | A | P | A | V | E | A | S | R | A | T | L | A | A | N | G | V | E | . |
. |
. |
. |
. |
G | E | V | F | A | S | N | V | F | S | E | V | . |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
A | X | L | L | A | S | L | V | A | D | D | R | A | C | R | I | A | D | L | G | A | G | A | G | A | A | G | X | A | V | A | A | R | L | E | K | A | E | V | T | L | Y | E | R | S | Q | E | X | A | E | F | A | R | R | S | L | E | L | P | D | N | A | A | F | S | A | R | I | E | V | L | E | A | D | V | T | L | R | A | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
|
|
| S |
|  |  |  |  |  |
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | T | S | G | G | G | T | T | T | G | G | G |  |  |  |  |  |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | R | F | D | M | I | I | S | N | P | P | F | H | D | G | M | Q | T | S | L | D | A | A | Q | T | L | I | R | G | A | V | R | H | L | N | S | G | G | E | L | R | I | V | A | N | A | F | L | P | Y | P | D | V | L | D | E | T | F | G | F | H | E | V | I | A | . |
. |
. |
. |
. |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
A | R | V | E | A | G | L | P | D | E | H | F | H | H | V | I | X | N | P | P | Y | G | L | . |
. |
. |
. |
. |
. |
. |
. |
F | E | D | W | I | R | T | A | S | A | I | X | V | S | G | G | Q | L | S | L | I | S | R | P | Q | S | . |
V | A | E | I | I | A | A | C | G | S | R | F | G | G | L | E | I | T | L | I | H | P |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | . |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
  |   |
|
|
|
325 | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 |
Predicted Secondary structure |   |
. | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
Q | T | G | R | F | K | V | Y | R | A | I | M | T | R | Q | A |
Query Conservation |   |
. | . | . |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | P | G | E | D | A | V | R | X | L | V | T | A | I | K | G | S | R | A |
Template Known Secondary structure |   |
S | T | T | S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
  |