Job Description P39406 Confidence 98.66% Date Thu Jan 5 12:00:42 GMT 2012 Rank 289 Aligned Residues 142 % Identity 18% Template c2nyuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative ribosomal rna methyltransferase 2; PDBTitle: crystal structure of human ftsj homolog 2 (e.coli) protein2 in complex with s-adenosylmethionine Resolution 1.76 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.										220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																						.
Query SS confidence																											.	.	.	.	.	.	.	.	.																						.
Query Sequence		H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	.	.	.	.	.	.	.	.	.	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	.	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	D	M
Query Conservation																											.	.	.	.	.	.	.	.	.																						.
Alig confidence																											.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		R	P	G	L	R	V	L	D	C	G	A	A	P	G	A	W	S	Q	V	A	V	Q	K	V	N	A	A	G	T	D	P	S	S	P	V	G	F	V	L	G	V	D	L	L	H	I	F	P	L	E	G	A	T	F	L	C	P	A	D	V	T	D	P	R	T	S	Q	R	I	L	E	V	L	P	G	R	R	A	D	V
Template Known Secondary structure			T	T							T			S											T	T	T	T				T	T	S										S	S						T	T						S			T	T	S											S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		265	.	.	.	.	270							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																											.	.	.
Query SS confidence								.	.	.	.	.	.																																											.	.	.
Query Sequence		I	I	S	N	P	P	.	.	.	.	.	.	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	.	.	.	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R	A	I
Query Conservation								.	.	.	.	.	.																																											.	.	.
Alig confidence								.	.	.	.	.	.																																											.	.	.														.
Template Conservation																																																																								.
Template Sequence		I	L	S	D	M	A	P	N	A	T	G	F	R	D	L	D	H	D	R	L	I	S	L	C	L	T	L	L	S	V	T	P	D	I	L	Q	P	G	G	T	F	L	C	K	T	W	A	G	S	Q	S	R	R	L	Q	R	R	L	T	E	E	F	Q	N	V	R	I	I	K	P	.	E	V	Y	F	L	A	T	Q	Y
Template Known Secondary structure												S																																					S	G	G	G																				.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.
		336	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions