Job Description P39406 Confidence 90.75% Date Thu Jan 5 12:00:42 GMT 2012 Rank 365 Aligned Residues 77 % Identity 23% Template c2hwkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Resolution 2.45 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.			.	.	.																.
Query SS confidence																		.	.			.	.	.																.
Query Sequence		V	F	S	E	V	K	G	R	F	D	M	I	I	S	N	P	.	.	P	F	.	.	.	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	.	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G
Query Conservation																		.	.			.	.	.																.
Alig confidence																		.	.			.	.	.																.																.	.	.														.	.	.	.
Template Conservation																																																								.	.	.														.	.	.	.
Template Sequence		G	I	P	G	D	V	P	K	Y	D	I	I	F	V	N	V	R	T	P	Y	K	Y	H	H	Y	Q	Q	C	E	D	H	A	I	K	L	S	M	L	T	K	K	A	C	L	H	L	N	P	G	G	T	C	V	S	.	.	.	I	G	Y	G	Y	A	D	R	A	S	E	S	I	.	.	.	.	I	G	A	I	A	R
Template Known Secondary structure			S		T	T	S																S																T					G	G	G										.	.	.							S							.	.	.	.						T
Template Predicted Secondary structure																																																								.	.	.														.	.	.	.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.				720	.	.	.	.	.	.	.	.	.	730	.	.					.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	V	Y	R	A	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	K	F	S	R	V	C	K	P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		739	740	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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