Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence81.86%DateThu Jan 5 12:00:42 GMT 2012
Rank395Aligned Residues115
% Identity10%Templatec1bg6A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:n-(1-d-carboxylethyl)-l-norvaline dehydrogenase; PDBTitle: crystal structure of the n-(1-d-carboxylethyl)-l-norvaline2 dehydrogenase from arthrobacter sp. strain 1c
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230......... 240......... 250.........260.........
Predicted Secondary structure 














....



...











Query SS confidence 










































. . . .









. . .



















Query Sequence  KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRAT. . . . LAANGVEGEV. . . FASNVFSEVKGRFDMIISNP
Query Conservation     




 
 
                  
        
   ....     
    ...   
         
 

 

Alig confidence 










































....









...

















..
Template Conservation   
  



 
  
   
  

  
  
    
       
   
                  
     
    
 


..
Template Sequence  SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI. .
Template Known Secondary structure 



STT

S
TSSSS



SS
TT
S..
Template Predicted Secondary structure 
































..
Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80.
 
   270.........280.........290.........300.........310.........
Predicted Secondary structure 
















Query SS confidence 

















































Query Sequence  PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF
Query Conservation 
 
                    
 


 
  
 
  
 
   
      
Alig confidence  ......











































Template Conservation  ...... 
 
         
         

   

              
Template Sequence  . . . . . . VVPAIHHASIAANIASYISEGQLIILNPGATGGALEFRKILREN
Template Known Secondary structure  ......
S
GGGGGG

TT
SS

SST
Template Predicted Secondary structure  ......















Template SS confidence 

















































   82.......90.........100.........110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions