Job Description P76319 Confidence 99.83% Date Thu Jan 5 12:21:46 GMT 2012 Rank 28 Aligned Residues 139 % Identity 13% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.
Predicted Secondary structure												.																																.	.	.	.																												.	.	.	.	.
Query SS confidence												.																																.	.	.	.																												.	.	.	.	.
Query Sequence		F	T	I	K	T	D	D	L	T	H	.	P	A	V	Q	A	L	V	A	Y	H	I	S	G	M	L	Q	Q	S	P	P	E	S	S	H	A	L	D	V	Q	K	L	.	.	.	.	R	N	P	T	V	T	F	W	S	V	W	E	G	E	Q	L	A	G	I	G	A	L	K	L	L	D	D	.	.	.	.	.	K	H
Query Conservation												.																																.	.	.	.																												.	.	.	.	.
Alig confidence												.																																.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P	A	P	K	L	S	G	Q
Template Known Secondary structure									G	G	G	G	G	G	G													G	G	G														T	T	T	S	T	T											T	T												S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	K	S	M	R	T	A	P	N	Y	L	R	R	G	V	A	S	L	I	L	R	H	I	L	Q	V	A	Q	D	R	C	L	H	R	L	S	L	E	T	G	T	Q	A	G	F	T	A	C	H	Q	L	Y	L	K	H	G	F	A	D	C	E	P	F	A	D	Y	R	L	D
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L	X	K	H	L	A	T	I	A	I	T	H	N	C	Q	R	L	D	W	T	.	.	A	E	S	T	N	P	T	A	G	K	F	Y	K	S	I	G	A	S	L	I	R	E	K	E	Y	Y	R	F	E
Template Known Secondary structure											G	G	G	T	T	S																	T	T								.	.			T	T											T	T					T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions