Return to main results Retrieve Phyre Job Id

Job DescriptionP76319
Confidence99.82%DateThu Jan 5 12:21:46 GMT 2012
Rank40Aligned Residues147
% Identity16%Templatec2reeB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.......
Predicted Secondary structure 




.












.............
Query SS confidence 









.























































. . . . . . . . . . . . .
Query Sequence  FTIKTDDLTH. PAVQALVAYHISGMLQQSPPESSHALDVQKLRNPTVTFWSVWEGEQLAGIGALKLL. . . . . . . . . . . . .
Query Conservation    

     
.     
                                 

      

       .............
Alig confidence 









.





















.....




























.............
Template Conservation 
 

 
   

  
  
    
           .....   
                 
                    
Template Sequence  YNLRHPKIEDLRDLIALETLCWSENLQVDNEEI. . . . . YRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQ
Template Known Secondary structure 


GGGS
TTT


.....
GGG
TTS
GGGGTT

TTT
Template Predicted Secondary structure 











.....




















Template SS confidence 















































































   228.230.........240.........250.........260 .........270.........280.........290.........300..
 
   68.70.........80.........90.........100... ......110........
Predicted Secondary structure  .......






.





.....................
Query SS confidence  . . . . . . .



































.














. . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . DDKHGELKSMRTAPNYLRRGVASLILRHILQVAQDR. CLHRLSLETGTQAGF. . . . . . . . . . . . . . . . . . . . .
Query Conservation  .......      
  
 
 
  

 


  

  
   
   .
     
 
 
   
.....................
Alig confidence  .......



































.







..




.....................
Template Conservation               
  
 
 
  

 


  

   
  
    
   
   ..

  
           
       
 
Template Sequence  VPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAV. . TLCRNYPDYSPMPMAEYIHQKNESGL
Template Known Secondary structure  GGGG

TT
S
TTSTTSSTTSTT

..

SSGGGGTTS
TT
B
TTS
Template Predicted Secondary structure 


















..














Template SS confidence 















































































   303......310.........320.........330.........340.........350.... .....360.........370.........380
 
   119120.........130.........140 .........150.....
Predicted Secondary structure  ..







.....







Query SS confidence  . .





















. . . . .














Query Sequence  . . TACHQLYLKHGFADCEPFADYR. . . . . LDPHSRFLSLTLCEN
Query Conservation  ..  
  

 
 

          .....       
 
 
   
Alig confidence  ..





















.....














Template Conservation    

 
 
    

        
   
        
        
Template Sequence  LVDPLLRFHQIHGAKIEKLLPGYRPKDWENQTCGVLVSYDIQHR
Template Known Secondary structure  BSSTT
TTS
TT
GGGTT


TT
Template Predicted Secondary structure 






















Template SS confidence 











































   381........390.........400.........410.........420....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions