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Job DescriptionP75736
Confidence100.00%DateThu Jan 5 12:13:35 GMT 2012
Rank47Aligned Residues249
% Identity19%Templatec3qyjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alr0039 protein; PDBTitle: crystal structure of alr0039, a putative alpha/beta hydrolase from2 nostoc sp pcc 7120.
Resolution1.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.. .......70....
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Query Sequence  MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDPVM. . . . . . NYPAMAQDLVDT
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Template Sequence  ARINLVKA. . . . . GHGAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEV
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TT

GGGGTTTTTT

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GGGGGGS
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   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  LDAQQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLN
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Template Sequence  MSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETLIGANPE
Template Known Secondary structure  TT
SST
TTTS


T

TTTT
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   155 ....160.........170.........180.........190.........200.........210...
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Query Sequence  E. . . . . . . . . . . . . . . . . . . . . EGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQY
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Template Sequence  YYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYD
Template Known Secondary structure 
S
GGGS
TSTTTTT

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S
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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   214.....220.........230.........240.........250....
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Query Sequence  RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND
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Template Sequence  VLATWRERAIDVSGQSLPCGHFLPEEAPEETYQAIYNFLTH
Template Known Secondary structure  TTBSSSSSS
S
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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