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Job DescriptionP75736
Confidence99.39%DateThu Jan 5 12:13:35 GMT 2012
Rank169Aligned Residues177
% Identity21%Templatec3og9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein yahd a copper inducible hydrolase; PDBTitle: structure of yahd with malic acid
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40........ .50.........60.. ......
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Query Sequence  NIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQV. . . . . . . . . . . . . DMRNHGLSPRDPVM. . NYPAMA
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Template Sequence  DYVFK. . AGRKDLAPLLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEET
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TTS



TT

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SB
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   3.... ..10.........20.........30.........40.........50.........60.........70.........80
 
   6970....... ..80.........90.........100.........110.........120.........130.........140..
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Query Sequence  QDLVDTLDA. . . . . . QQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTR
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Template Sequence  DWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T

GGG
TTTS


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   81........90.........100.........110.........120.........130.........
 
   143......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  QQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF.
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLE
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TT

TT
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   140.........150.........160.........170...
 
   222.......230.........240.........250....
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Query Sequence  . . . PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND
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Template Sequence  DSGCQLEIYESSL. GHQLT. . . . QEEVLAAKKWLTE
Template Known Secondary structure  TT

SS.TTS

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   174.....180...... ...190. ........200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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