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Job DescriptionP75736
Confidence99.90%DateThu Jan 5 12:13:35 GMT 2012
Rank98Aligned Residues245
% Identity11%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  AQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFI
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Template Sequence  VLQGLPMVARKTLFMLPDGGGSAFSYASL. PRLKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRRQPRGPYHLG
Template Known Secondary structure  S
TTTSS

TT

GGGGTTS.


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   1856...1860.........1870.........1880.... .....1890.........1900.........1910.........1920.........1930....
 
   87..90.........100 .........110.........120.........130.........140.........150.........160...
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Query Sequence  GHSMGGKAVMALTA. . . LASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLL
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Template Sequence  GWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVV
Template Known Secondary structure  TTT

S

SS






TTTTTTSSSS
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   1935....1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010....
 
   164..... 170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  KSFVDG. . . . EWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAE
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Template Sequence  DVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPG. ASFDIVRADGANHFTLMQ
Template Known Secondary structure  TTT







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   2015....2020.........2030.........2040.........2050.........2060.........2070..... ....2080.........2090...
 
   240. ........250...
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Query Sequence  KP. . DAVLRAIRRYLN
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Template Sequence  KEHVSIISDLIDRVMA
Template Known Secondary structure  TTTTT
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   2094.....2100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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