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Job DescriptionP75736
Confidence99.33%DateThu Jan 5 12:13:35 GMT 2012
Rank174Aligned Residues204
% Identity13%Templatec3hxkB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:sugar hydrolase; PDBTitle: crystal structure of a sugar hydrolase (yeeb) from2 lactococcus lactis, northeast structural genomics3 consortium target kr108
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20...... ...30.........40. ........50.........60.........70.........80
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Query Sequence  IRAQTAQNQHNNSPIVLVHGLF. . . GSLDNLGVLARDLVN. DHNIIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQI
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Template Sequence  VDFYQLQ. NYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVXNKGTNYNFLSQNLEEVQAVFSLIHQNH
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B


STTTS

GGGSTT



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S
TT
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   27..30... ......40.........50.........60.........70.........80.........90.........100.....
 
   81 ........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  D. . . . . . . KATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHL
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Template Sequence  KEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTB
TTS
SSS
STT

S


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   112.......120.........130.........140.........150.......
 
   154.....160.........170.........180.........190.........200.........210.........220.. .......
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Query Sequence  NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP. . . . QARAHVI
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Template Sequence  . . . . . . . . . . . TFGWPSDLSHFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFF
Template Known Secondary structure  ...........TSS
SSSSSSS



S

GGGBTTTT

TTS

TT
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TTTT

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   158.160.........170.........180.........190.........200.........210.........220......
 
   230...... ...240.........250....
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Query Sequence  AGAGHWV. . . . . . . . . . . . . HAEKPDAVLRAIRRYLND
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Template Sequence  ESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLER
Template Known Secondary structure  S


TT
TT
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   227..230.........240.........250.........260....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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