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Job DescriptionP75736
Confidence99.97%DateThu Jan 5 12:13:35 GMT 2012
Rank66Aligned Residues239
% Identity13%Templatec3dqzB_
PDB info PDB header:lyaseChain: B: PDB Molecule:alpha-hydroxynitrile lyase-like protein; PDBTitle: structure of the hydroxynitrile lyase from arabidopsis2 thaliana
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40. ........50.........60. ........70.........80 .........90
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Query Sequence  NNSPIVLVHGLFGSLDNLGVLARDLVN. DHNIIQVDMRNHGLSPRDPV. . MNYPAMAQDLVDTLDAQQI. DKATFIGHSM
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Template Sequence  RKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSF
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TT

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  GGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGE
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Template Sequence  GGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNC
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GGGS




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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   171........180....... ..190.........200.........210.........220.........230.........240
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Query Sequence  WRFNVPVLWDQYPHIVG. . . . . . . . . . WEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK
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Template Sequence  PIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHMVMLSK
Template Known Secondary structure 
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TTTGGGSTT
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   241........250...
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Query Sequence  PDAVLRAIRRYLN
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Template Sequence  PQKLFDSLSAIAT
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   243......250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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