Job Description P75736 Confidence 99.23% Date Thu Jan 5 12:13:35 GMT 2012 Rank 187 Aligned Residues 186 % Identity 23% Template c3d59B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:platelet-activating factor acetylhydrolase; PDBTitle: crystal structure of human plasma platelet activating2 factor acetylhydrolase Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																		.																										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	N	I	R	A	Q	T	A	Q	N	Q	H	N	N	.	S	P	I	V	L	V	H	G	L	F	G	S	L	D	N	L	G	V	L	A	R	D	L	V	N	.	D	H	N	I	I	Q	V	D	M	R	N	H	G	L	S	P	R	D	P	V	M	N	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																										.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	T	P	A	N	W	N	S	P	L	R	P	G	E	K	Y	P	L	V	V	F	S	H	G	L	G	A	F	R	T	L	Y	S	A	I	G	I	D	L	A	S	H	G	F	I	V	A	A	V	E	H	R	D	R	S	A	S	A	T	Y	Y	F	K	D	Q	S	A	A	E	I	G	D	K	S	W	L	Y	L	R
Template Known Secondary structure					S	S			T			B			S												T	T			T	T	T	T										T	T										S	S		S	S						S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
																	65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	M	A	Q	D	L	V	D	T	L	D	A	Q	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	K	Q	E	E	E	T	H	I	R	N	E	Q	V	R	Q	R	A	K	E	C	S	Q	A	L	S	L	I	L	D	I	D	H	G	K	P	V	K	N	A	L	D	L	K	F	D	M	E	Q	L	K	D	S	I	D	R	E	K	I	A	V	I	G	H	S	F	G	G	A	T	V	I	Q	T	L	S	E	D	Q
Template Known Secondary structure																																			T	T						S	S			S			G	G	G	G	T	T													T														T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V	R	R	H	D	E	I	F	A	A	I	N	A	V	S	E	S	D	A	Q	T	R	Q	Q	A	A	A	I	M	R	Q	H	L	N	E	E	G	V	I	Q	F	L	L	K	S	F	V	D	G	E	W	R	F	N	V	P	V	L	W	D	Q	Y	P
Query Conservation
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	R	F	R	C	G	I	A	L	D	A	W	M	F	P	L	G	D	E	V	Y	S	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	T								S				T	T	S		T	T	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																				240	.	.	.
Predicted Secondary structure																																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	V	G	W	E	K	I	P	A	W	D	H	P	A	L	F	I	P	G	G	N	S	P	Y	V	S	E	Q	Y	R	.	D	D	L	L	A	Q	F	P	Q	A	R	A	H	V	I	A	G	A	G	H	W	V	H	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	D	A
Query Conservation																																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	Q	P	L	F	F	I	N	S	E	Y	F	Q	Y	P	A	N	I	I	K	M	K	K	C	Y	S	P	D	K	E	R	K	M	I	T	I	R	G	S	V	H	Q	N	F	A	D	F	T	F	A	T	G	K	I	I	G	H	M	L	K	L	K	G	D	I	D	S	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		S								S	S	S												T			T	T	S								T	T			G	G	G	G	S	G	G	G	G	T	S								T	T	S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		244	.	.	.					.	.	250	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		V	L	R	A	.	.	.	.	I	R	R	Y	L	N	D
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		A	I	D	L	S	N	K	A	S	L	A	F	L	Q	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions