Job Description P75736 Confidence 92.15% Date Thu Jan 5 12:13:35 GMT 2012 Rank 263 Aligned Residues 119 % Identity 17% Template c3biwD_ PDB info PDB header:cell adhesion/cell adhesion Chain: D: PDB Molecule:neuroligin-1; PDBTitle: crystal structure of the neuroligin-1/neurexin-1beta synaptic adhesion2 complex Resolution 3.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.												.	.	.																										.	.	.	.	.	.	.
Query SS confidence															.	.	.												.	.	.																										.	.	.	.	.	.	.
Query Sequence		L	N	I	R	A	Q	T	A	Q	N	Q	H	N	.	.	.	N	S	P	I	V	L	V	H	G	L	F	.	.	.	G	S	L	D	N	L	G	V	L	A	R	D	L	V	N	D	H	N	I	I	Q	V	D	M	R	.	.	.	.	.	.	.	N	H	G	L	S	P	R	D	P	V	M	N	Y	P	A	M	A	Q
Query Conservation															.	.	.												.	.	.																										.	.	.	.	.	.	.
Alig confidence															.	.	.												.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	L	N	I	Y	V	P	T	I	R	D	S	G	G	P	K	P	V	M	V	Y	I	H	G	G	S	Y	M	E	G	T	G	N	L	Y	D	G	S	V	L	A	S	Y	G	N	V	I	V	I	T	V	N	Y	R	L	G	V	L	G	F	L	S	T	G	D	Q	A	A	K	G	N	Y	G	L	L	D	L	I	Q
Template Known Secondary structure													S			S											S	S	S	S	S			T	T	T	S										T																	B		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure													.	.	.	.	.																									.	.	.
Query SS confidence													.	.	.	.	.																									.	.	.
Query Sequence		D	L	V	D	T	L	D	A	Q	Q	I	.	.	.	.	.	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	S	D	.	.	.	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V
Query Conservation													.	.	.	.	.																									.	.	.
Alig confidence													.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		A	L	R	W	T	S	E	N	I	G	F	F	G	G	D	P	L	R	I	T	V	F	G	S	G	A	G	G	S	C	V	N	L	L	T	L	S	H	Y	S	E	K	G	L	F	Q	R	A	I	A	Q	S	G	T	A	L	S	S	W	A
Template Known Secondary structure										G	G	G	G	T												T										T	T	S	T	T	S		T	T	S								T			S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions