Job Description P75736 Confidence 100.00% Date Thu Jan 5 12:13:35 GMT 2012 Rank 27 Aligned Residues 251 % Identity 14% Template c3a2nF_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:haloalkane dehalogenase; PDBTitle: crystal structure of dbja (wild type type ii p21) Resolution 1.89 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		M	K	L	N	I	R	A	Q	T	A	Q	N	Q	H	N	N	S	P	I	V	L	V	H	G	L	F	G	S	L	D	N	L	G	V	L	A	R	D	L	V	N	D	H	N	I	I	Q	V	D	M	R	N	H	G	L	S	P	R	D	P	V	.	M	N	Y	P	A	M	A	Q	D	L	V	D	T	L	D	A	Q	Q
Query Conservation																																																															.
Alig confidence										.	.	.																																																			.
Template Conservation										.	.	.
Template Sequence		S	S	M	A	Y	R	E	T	.	.	.	G	A	Q	D	A	P	V	V	L	F	L	H	G	N	P	T	S	S	H	I	W	R	N	I	L	P	L	V	S	P	V	A	H	C	I	A	P	D	L	I	G	F	G	Q	S	G	K	P	D	I	A	Y	R	F	F	D	H	V	R	Y	L	D	A	F	I	E	Q	R	G
Template Known Secondary structure										.	.	.	S		T	T	S									T	T			G	G	G	G	T	T	T					T	T	T	S								T	T	S	T	T	S				S	S																			T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	S	D	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	D	E	I	F	A	A	I	N	A	V	S	E	S	D
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	S	A	Y	L	V	A	Q	D	W	G	T	A	L	A	F	H	L	A	A	R	R	P	D	F	V	R	G	L	A	F	M	E	F	I	R	P	M	P	T	W	Q	D	F	H	H	T	E	V	A	E	E	Q	D	H	A	E	A	A	R	A	V	F	R	K	F	R	T	P	G	E	G	E	A	M	I	L	E	A
Template Known Secondary structure				S																					T	T	T													B	S	S	G	G	G	T	T					G	G	G															T	S	T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.												.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	T	R	Q	Q	A	A	A	I	M	R	Q	H	L	N	E	E	G	V	I	Q	F	L	L	K	S	F	V	D	G	E	W	R	F	N	V	P	V	L	W	D	Q	Y	P	H	I	V	G	W	E	K	I	P	.	.	.	.	.	.	.	.	.	.	.	A	W	D	H	P	A	L	F	I	P	G	G	N	S	P
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	F	V	E	R	V	L	P	G	G	I	V	R	K	L	G	D	E	E	M	A	P	Y	R	T	P	F	P	T	P	E	S	R	R	P	V	L	A	F	P	R	E	L	P	I	A	G	E	P	A	D	V	Y	E	A	L	Q	S	A	H	A	A	L	A	A	S	S	Y	P	K	L	L	F	T	G	E	P	G	A
Template Known Secondary structure							T					T		S	S												T	T			S	T	G	G	G										S		B	T	T	B	S																			S											S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	S	E	Q	Y	R	D	D	L	L	A	Q	F	P	Q	A	R	A	H	V	I	A	G	A	G	H	W	V	H	A	E	K	P	D	A	V	L	R	A	I	R	R	Y	L	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	S	P	E	F	A	E	R	F	A	A	S	L	T	R	C	A	L	I	R	L	G	A	G	L	H	Y	L	Q	E	D	H	A	D	A	I	G	R	S	V	A	G	W	I	A	G
Template Known Secondary structure		S	S											T	S	S	S											S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions