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Job DescriptionP75736
Confidence100.00%DateThu Jan 5 12:13:35 GMT 2012
Rank24Aligned Residues250
% Identity13%Templatec2xt0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase; PDBTitle: dehalogenase dppa from plesiocystis pacifica sir-i
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKLNIRAQTAQNQHNN. SPIVLVHGLFGSLDNLGVLARDLVN. DHNIIQVDMRNHGLS. . . PRDPVMNYPAMAQDLVDTL
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Template Sequence  LRMHYVDE. . . GPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFL
Template Known Secondary structure 

...S
TT
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TT

GGGGTTTTT


TTSTTS
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GGG

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   33......40 .........50.........60.........70.........80.........90.........100.........
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  DAQQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNE
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Template Sequence  DALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDA
Template Known Secondary structure  T

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TT
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SSS
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T
TT

STT

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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   156...160. ........170.........180.........190.........200.........210.........220.... .
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Query Sequence  EGVIQF. . . . . . . . . LLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQA. R
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Template Sequence  EVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPE
Template Known Secondary structure  TT
SSGGG
GGGGS

STTSTTT

S
TT
SSSSSTT


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   190.........200.........210.........220.........230.........240.........250.........260.........
 
   226...230.........240.........250...
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Query Sequence  AHVIAGAGHWVHAEKPDAVLRAIRRYLN
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Template Sequence  PMIVEAGGHFVQEHGEPIARAALAAFGQ
Template Known Secondary structure 
TT

SSGGGG
TT
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   270.........280.........290.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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