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Job DescriptionP75736
Confidence99.85%DateThu Jan 5 12:13:35 GMT 2012
Rank109Aligned Residues221
% Identity14%Templatec2h7xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:type i polyketide synthase pikaiv; PDBTitle: pikromycin thioesterase adduct with reduced triketide2 affinity label
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20..... ....30.........40.........50.........60 .........70..... ....80
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Query Sequence  IRAQTAQNQHNNSPIVLVHGL. . FGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDP. VMNYPAMAQDLVDTL. DAQQI
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Template Sequence  VLLAGGPTDEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGGTALLPADLDTALDAQARAILRAAGD
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TT
STTTTTTTTT



TT

B

B

SSTT
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   81........90.........100.... .....110.........120.........130.........140.........150......
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Query Sequence  DKATFIGHSMGGKAVMALTALASD. . . . RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEE
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Template Sequence  APVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARL. . . . . . . . .
Template Known Secondary structure  S
TS


SS


TT

TT
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   140.........150.........160.........170.........180.........190.........200.........210
 
   157..160.........170.........180.........190.........200.........210.........220.... .....230.....
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Query Sequence  GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQA. RAHVIAGAGHW
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Template Sequence  . . . . . . . . . . . . . . . . . . . . LAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPGDHFT
Template Known Secondary structure  ....................S






S
SS
SS


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S


SS
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TT
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   211........220.........230.........240.........250.........260.........270
 
   236...240.........250....
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Query Sequence  VHAEKPDAVLRAIRRYLND
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Template Sequence  MMRDHAPAVAEAVLSWLDA
Template Known Secondary structure  TT
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   271........280.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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