Job Description P75736 Confidence 99.56% Date Thu Jan 5 12:13:35 GMT 2012 Rank 151 Aligned Residues 213 % Identity 10% Template c2g5tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: crystal structure of human dipeptidyl peptidase iv (dppiv)2 complexed with cyanopyrrolidine (c5-pro-pro) inhibitor 21ag Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.
Predicted Secondary structure													.	.	.																.	.	.	.	.															.																.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																.	.	.	.	.															.																.	.	.	.	.	.	.	.	.
Query Sequence		K	L	N	I	R	A	Q	T	A	Q	N	.	.	.	Q	H	N	N	S	P	I	V	L	V	H	G	L	F	G	.	.	.	.	.	S	L	D	N	L	G	V	L	A	R	D	L	V	N	.	D	H	N	I	I	Q	V	D	M	R	N	H	G	L	S	.	.	.	.	.	.	.	.	.	P	R	D	P	V	M	N
Query Conservation													.	.	.																.	.	.	.	.															.																.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																.	.	.	.	.															.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	W	Y	Q	M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	I	I	V	A	S	F	D	G	R	G	S	G	Y	Q	G	D	K	I	M	H	A	I	N	R	R	L	G	T	F	E
Template Known Secondary structure											T	T			T	T	S												T	T						S					S								T	T										T	T		S	S	S						G	G	G	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		Y	P	A	M	A	Q	D	L	V	D	T	L	D	A	.	.	Q	Q	I	D	K	A	T	F	I	G	H	S	M	G	G	K	A	V	M	A	L	T	A	L	A	S	D	R	I	D	K	L	V	A	I	D	I	A	P	V	D	Y	H	V	R	R	H	D	E	I	F	A	A	I	N	A	V	S	E	S	D	A	Q	T
Query Conservation																.	.
Alig confidence																.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	G	S	G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y	D	S	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	S	S	S												T											T	S						S						S					G	G	G	S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		R	Q	Q	A	A	A	I	M	R	Q	H	L	N	E	E	G	V	I	Q	F	L	L	K	S	F	V	D	G	E	W	R	F	N	V	P	V	L	W	D	Q	Y	P	H	I	V	G	W	E	K	I	P	A	W	D	.	H	P	A	L	F	I	P	G	G	N	S	P	Y	V	S	E	Q	Y	R	D	D	L	L	A	Q
Query Conservation																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	R	Y	M	G	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	T	T	T	T							T		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
		221					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure			.	.	.	.																		.
Query SS confidence			.	.	.	.																		.
Query Sequence		F	.	.	.	.	P	Q	A	R	A	H	V	I	A	G	A	G	H	W	V	H	A	.	E	K	P	D	A	V	L	R	A	I	R	R	Y	L	N	D
Query Conservation			.	.	.	.																		.
Alig confidence			.	.	.	.																		.
Template Conservation
Template Sequence		L	V	D	V	G	V	D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	A	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I	K	Q
Template Known Secondary structure						T									T	T			T	T			S
Template Predicted Secondary structure
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions