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Job DescriptionP75736
Confidence98.83%DateThu Jan 5 12:13:35 GMT 2012
Rank214Aligned Residues253
% Identity13%Templatec1mpxB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40. ........50.........60.
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Query Sequence  MKLNIRAQTAQNQHNNSPIVLVHGLFGS. . . . . . . . . . . LDNLGVLARDLVN. DHNIIQVDMRNHGLSPRDPV. . . . . . .
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Template Sequence  VKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHXKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVXTRPLRG
Template Known Secondary structure 
TT

SSS
T
SS

S
S
GGGTT

TTSTT

S


TT


SB
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   58.60.........70.........80.........90.........100.........110.........120.........130.......
 
   62.......70....... ..80.........90.........100.........110......... 120.
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Query Sequence  . . . . . . . MNYPAMAQDLVDTLDA. . QQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDY. . . . . . . . . . . HV
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Template Sequence  PLNPSEVDHATDAWDTIDWLVKNVSESNGKVGXIGSSYEGFTVVXALTNPHPALKVAVPESPXIDGWXGDDWFNYGAFRQ
Template Known Secondary structure  TTB
SS


TTTTS

TTS



TTTTSSSTTBG
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   122.......130.........140.........150.........160.........170. ........180.........190......
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Query Sequence  RRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEW. . . . . RFNVPVLWDQYPHIVGWEKIPAWDH
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Template Sequence  VNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVXARTPLKV
Template Known Secondary structure  GGSSSS






SSS

STTGGGST
SS
TT
TS


S
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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   197..200.........210....... ..220.........230.........240 .........250...
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Query Sequence  PALFIPGGNSPYVSEQYRDDL. . . . . LAQFPQARAHVIAGAGHWVHAEK. . . . . . . . . . . . . . PDAVLRAIRRYLN
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Template Sequence  PTXWLQGLWDQEDXWGAIHSYAAXEPRDKRNTLNYLVXGPWRHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFD
Template Known Secondary structure 
TT
SS
SSGGG
TTSSSS
STTGGGS

STT
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T
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   298.300.........310.........320.........330.........340.........350.........360.........370...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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