Job Description P03856 Confidence 99.97% Date Thu Jan 5 10:58:05 GMT 2012 Rank 4 Aligned Residues 105 % Identity 21% Template d2nrac2 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Replication initiation protein Resolution 3.10

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																			.																					.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																					.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	R	F	T	Q	F	R	L	S	E	T	K	E	I	T	N	P	Y	A	M	R	L	Y	E	S	L	C	Q	Y	R	K	P	.	D	G	S	G	I	V	S	L	K	I	D	W	I	I	E	R	Y	Q	L	P	.	.	.	.	.	.	.	.	.	Q	S	Y	Q	R	M	P	D	F	R	R	R	F	L	Q	V	C
Query Conservation																																			.																					.	.	.	.	.	.	.	.	.
Alig confidence																																			.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	K	F	T	T	Q	L	L	T	A	S	L	R	L	S	S	Q	Y	S	S	S	L	Y	Q	L	I	R	K	H	Y	S	N	F	K	K	K	N	Y	F	I	I	S	V	D	E	L	K	E	E	L	I	A	Y	T	F	D	K	D	G	N	I	E	Y	K	Y	P	D	F	P	I	F	K	R	D	V	L	N	K	A
Template Known Secondary structure			T	T																											T				S	S	S																T						S	S	S	S				S	S		S								T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		V	N	E	I	N	S	R	T	P	M	R	L	S	Y	I	E	K	.	.	K	K	G	R	Q	T	T	H	I	V	F	S	F	R	D	I	T	S
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		I	A	E	I	K	K	K	T	E	I	S	F	V	G	F	T	V	H	E	K	E	G	R	K	I	S	K	L	K	F	E	F	V	V	D	E	D
Template Known Secondary structure									S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions