Job Description P03856 Confidence 99.93% Date Thu Jan 5 10:58:05 GMT 2012 Rank 6 Aligned Residues 130 % Identity 18% Template d2nrac1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Replication initiation protein Resolution 3.10

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	S	P	R	I	V	Q	S	N	D	L	T	E	A	A	Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		N	K	K	T	K	I	R	H	R	N	E	L	N	H	T	L	A	Q	L	P	L	P	A	K	R	V	M	Y	M	A	L	A	L	I	D	S	K	E	.	.	P	L	E	R	G	R	V	F	K	I	R	A	E	D	L	A	A	L	A	K	I	T	P	S	L	A	Y	R	Q	L	K	E	G	G	K	L	L	G	A	S
Template Known Secondary structure			S	S							G	G	G							S														T	S		T	T	S	.	.				S	S															T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		E	V	V	F	Y	R	P	E	E	D	A	.	.	.	G	D	E	K	G	Y	E	S	F	P	W	F	I	K	R	A	H	S	P	S	R	G	L	Y	S	V	H	I	N	P	Y	L	I	P	F	F	I	G	L	Q	N
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		K	I	S	L	R	G	D	D	I	I	A	L	A	K	E	L	N	S	E	E	L	D	L	N	I	I	E	W	I	A	Y	S	P	D	E	G	Y	L	S	L	K	F	T	R	T	I	E	P	Y	I	S	S	L	I	G
Template Known Secondary structure		B					S	S									T								B	S								T	T	T	T								T	T	T	G	G	G	S	S			S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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