Return to main results Retrieve Phyre Job Id

Job DescriptionP03856
Confidence6.58%DateThu Jan 5 10:58:05 GMT 2012
Rank97Aligned Residues46
% Identity11%Templated2fxaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80........
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  YSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKS
Query Conservation    

  
 


   
  
               
   

           
  

     
Alig confidence 

















..............



























Template Conservation    

  
  

  
    ..............  
  


  
 
  



  
  

  
Template Sequence  YDLNINEHHILWIAYQLN. . . . . . . . . . . . . . GASISEIAKFGVXHVSTAFNFSKKLEER
Template Known Secondary structure  GT

T..............STT

Template Predicted Secondary structure 





..............






Template SS confidence 



























































   42.......50......... 60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions