Job Description P03856 Confidence 36.78% Date Thu Jan 5 10:58:05 GMT 2012 Rank 27 Aligned Residues 106 % Identity 14% Template d2etha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.30

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P	E	E	D	A	G	D	E	K	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	X	K	T	T	E	L	Y	A	F	L	Y	V	A	L	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	K	X	K	E	I	A	E	F	L	S	T	T	K	S	N	.	.	.	.	V	T	N	V	V	D	S	L	E	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S																.	.	.	.	.	.	.	.	.	.	.	.	.	.		B									T	T	S					.	.	.	.											T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	S	F	P	W	F	I	K	R	A	H	S	P	S	R	G	L	Y	S	V	H	I	N	P	Y	L	I	P	F	F	I	G	L	Q	N	R	F	T	Q	F	R	L	S	E	T	K	E	I	T	N	P	Y	A	M	R	L	Y	E	S	L	C	Q	Y
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	V	V	R	E	X	D	P	V	D	R	R	T	Y	R	V	V	L	T	E	K	G	K	E	I	F	G	E	I	L	S	N	F	E	S	L	L	K	S	V	L	E	K	F	S	E	E	D	F	K	V	V	S	E	G	F	N	R	X
Template Known Secondary structure		.	.	.	.	.	S							T	T	T	S	S																														T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions