Job Description P03856 Confidence 40.75% Date Thu Jan 5 10:58:05 GMT 2012 Rank 23 Aligned Residues 65 % Identity 22% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P	E	E	D	A	G	D	E	K	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		L	S	F	K	P	S	D	V	R	I	Y	S	L	L	L	E	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	.	.	.	.	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I
Template Known Secondary structure		T																		.	.	.	.	.	.	.	.	.	.	.	.	.	.		B										T						.	.	.	.											T	T	S								S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.															.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		109	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		77	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions