Job Description P03856 Confidence 18.57% Date Thu Jan 5 10:58:05 GMT 2012 Rank 55 Aligned Residues 58 % Identity 9% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P	E	E	D	A
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		H	G	L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	.	.	.	.	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I	K	G	E
Template Known Secondary structure		T	T																S	S		.	.	.	.	.	.	.	.	.	.	.	.	.											T						.	.	.	.											T	T	S							T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions