Job Description P03856 Confidence 99.94% Date Thu Jan 5 10:58:05 GMT 2012 Rank 5 Aligned Residues 125 % Identity 22% Template d1hkqa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Replication initiation protein Resolution 2.75

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	N	D	L	T	E	A	A	Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P
Query Conservation
Alig confidence																																								.	.																																								.
Template Conservation																																								.	.																																								.
Template Sequence		Q	S	N	K	L	I	E	S	S	H	T	L	T	L	N	E	K	R	L	V	L	C	A	A	S	L	I	D	S	R	K	P	L	P	K	D	G	Y	.	.	L	T	I	R	A	D	T	F	A	E	V	F	G	I	D	V	K	H	A	Y	A	A	L	D	D	A	A	T	K	L	F	N	R	D	I	R	R	Y	V	.
Template Known Secondary structure												T	S														T			T	T	S				G	G	G		.	.												T	T																			T								.
Template Predicted Secondary structure																																								.	.																																								.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D	A	G	D	E	K	G	Y	E	S	F	P	W	F	I	K	R	A	H	S	P	S	R	G	L	Y	S	V	H	I	N	P	Y	L	I	P	F	F	I	G	L	Q	N	R	F	T	Q	F	R	L	S
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	G	K	V	V	E	R	M	R	W	V	F	H	V	K	Y	R	E	G	Q	G	C	V	E	L	G	F	S	P	T	I	I	P	H	L	T	M	L	H	K	E	F	T	S	Y	Q	L	K
Template Known Secondary structure		.	.	.	.	.	T	T								S								T	T	T	T								T	T	T	T	T	T											T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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