Job Description P03856 Confidence 73.67% Date Thu Jan 5 10:58:05 GMT 2012 Rank 9 Aligned Residues 79 % Identity 14% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	S	N	D	L	T	E	A	A	Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		F	K	V	E	D	V	I	K	C	A	L	N	L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	.	.	.	.	V	Q	R	S	V	K	K	L	H	E	K	E	I	L	Q	R	S
Template Known Secondary structure													T															S	T	T		.	.	.	.	.	.	.	.	.	.	.	.		B									T	T						.	.	.	.											T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.													.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	D	A	G	D	E	K	G	Y	E	S	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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