Return to main results Retrieve Phyre Job Id

Job DescriptionP03856
Confidence68.52%DateThu Jan 5 10:58:05 GMT 2012
Rank10Aligned Residues62
% Identity13%Templatec2v79B_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:dna replication protein dnad; PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20......... 30.........40.........50.........60.........70.........80........
Predicted Secondary structure 
..


















Query SS confidence 











. .


























































Query Sequence  IVQSNDLTEAAY. . SLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASKDIRQALKS
Query Conservation 
 


 

 
  .. 

  
 


   
  
               
   

           
  

     
Alig confidence 











..























.........

























Template Conservation 
 


 

  
  



  
  
 
 
          
.........
   

   
 
   
   
  
  
Template Sequence  STIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSYFP. . . . . . . . . TPNQLQEGMSISVEECTNRLRMFIQK
Template Known Secondary structure 



T

TTT

S
.........
TTSSS
Template Predicted Secondary structure 













.........




Template SS confidence 








































































   15....20.........30.........40.........50.. .......60.........70........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions