Job Description P03856 Confidence 36.12% Date Thu Jan 5 10:58:05 GMT 2012 Rank 28 Aligned Residues 43 % Identity 14% Template c2rnjA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator protein vrar; PDBTitle: nmr structure of the s. aureus vrar dna binding domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	R	E	M	E	I	L	L	L	I	A	K	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	Q	E	I	A	S	A	S	H	I	T	I	K	T	V	K	T	H	V	S	N	I	L	S	K	L
Template Known Secondary structure				S											T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							T																	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions