Job Description P03856 Confidence 6.50% Date Thu Jan 5 10:58:05 GMT 2012 Rank 98 Aligned Residues 120 % Identity 19% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		15	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		S	P	R	I	V	Q	S	N	D	L	T	E	.	.	.	A	A	Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G
Query Conservation														.	.	.
Alig confidence														.	.	.																													.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		E	G	R	L	Q	L	A	A	N	T	V	A	L	A	G	F	T	P	S	F	S	E	T	Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	.	.	.	.	.	.	.	.	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	.	.	.	.	L	E	E	L	L	H	Y	L	V	R
Template Known Secondary structure		T	T						S	S					T	T																								T	T	S			.	.	.	.	.	.	.	.									T	T						.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.									.	.	.	.	.	540	.	.	.	.	.	.	.	.	.					550	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		K	E	V	V	F	Y	R	P	E	E	D	A	G	D	E	K	G	Y	E	S	F	P	W	F	I	K	R	A	H	S	P	S	R	G	L	Y	S	V	H	I	N	P	Y	L	I	P	F	F	I	G	L	Q	N	.	.	R	F	T	Q	F	R	L	S	E	T	K	E	I	T	N	P	Y	A	M	R	L	Y	E	S	L
Query Conservation																																																							.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P	F	G	L	A	E	A	R	D	A	L	G	S	S	R	K	Y	V	L	P	L	L	E	Y	L
Template Known Secondary structure			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S	S	S	S																				T	T	S		B										T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		560	.																								.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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