Job Description P03856 Confidence 10.50% Date Thu Jan 5 10:58:05 GMT 2012 Rank 73 Aligned Residues 66 % Identity 9% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P	E	E	D	A	G	D	E	K	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		V	D	M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	.	.	.	.	.	.	.	.	.	.	.	.	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	.	.	.	.	L	V	Q	H	I	K	V	L	V	K	H	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y
Template Known Secondary structure			S	S													S		S		S	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S		G	G	G	.	.	.	.	T										T	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		109	110
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions