Job Description P03856 Confidence 18.96% Date Thu Jan 5 10:58:05 GMT 2012 Rank 54 Aligned Residues 58 % Identity 21% Template c1dpuA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88) Resolution UNK

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		S	L	S	R	D	Q	K	R	M	L	Y	L	F	V	D	Q	I	R	K	S	D	G	T	L	Q	E	H	D	G	I	C	E	I	H	V	A	K	Y	A	E	I	F	.	G	L	T	S	A	E	A	S	K	D	I	R	Q	A	L	K	S	F	A	G	K	E	V	V	F	Y	R	P	E	E	D
Query Conservation																																												.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.											.							.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		G	L	T	V	A	Q	N	Q	V	L	N	L	I	K	A	C	P	R	P	E	G	.	.	.	.	.	.	.	.	.	.	.	L	N	F	Q	D	L	K	N	Q	L	K	H	M	S	V	S	S	.	.	.	.	I	K	Q	A	V	D	F	L	S	N	E	G	H	I	Y	S	T	V	D	D	D
Template Known Secondary structure			S																	T	T	T	.	.	.	.	.	.	.	.	.	.	.										S	T	T	S					.	.	.	.											T	T	S					S	S	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.												.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions