Job Description P15082 Confidence 94.88% Date Thu Jan 5 11:34:40 GMT 2012 Rank 222 Aligned Residues 79 % Identity 10% Template d1r7ja_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Archaeal DNA-binding protein Resolution 1.47

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Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																		.	.	.	.	.
Query SS confidence													.																																																		.	.	.	.	.
Query Sequence		R	Q	A	A	I	L	E	Y	L	Q	K	.	Q	G	K	C	S	V	E	E	L	A	Q	Y	F	D	T	T	G	T	T	I	R	K	D	L	V	I	L	E	H	A	G	T	V	I	R	T	Y	G	G	V	V	L	N	K	E	E	S	D	P	.	.	.	.	.	P	I	D	H	K	T	L	I	N	T	H	K	K	E
Query Conservation													.																																																		.	.	.	.	.
Alig confidence													.																																																		.	.	.	.	.
Template Conservation
Template Sequence		K	L	E	I	I	Q	A	I	L	E	A	C	K	S	G	S	P	K	T	R	I	M	Y	G	A	N	L	S	Y	A	L	T	G	R	Y	I	K	M	L	M	D	L	E	I	I	R	Q	E	G	K	Q	Y	M	L	T	K	K	G	E	E	L	L	E	D	I	R	K	F	N	E	M	R	K	N	M	D	Q	L	K	E
Template Known Secondary structure														T	T		B										T																T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	N	S	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions