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Job DescriptionP15082
Confidence98.20%DateThu Jan 5 11:34:40 GMT 2012
Rank26Aligned Residues159
% Identity21%Templatec3ecsD_
PDB info PDB header:translationChain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90......... 100.........110 .........120 .........130.........140.
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Query Sequence  TLINTHKKELIAEAAVSFIHDGDSIILDA. GSTVLQMVPLL. SRFNNITVMT. . . . . . . NSLHIVNALSELDNEQTILMP
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Template Sequence  LRRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKXAKALCHLNVPVTVVL.
Template Known Secondary structure  TT

TT

S

TT




TTTTTTT


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   101........110.........120.........130.........140.........150.........160.........170.........
 
   142.......150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  GGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKS. . . . . .
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Template Sequence  . . . . . . . . . . . . DAAVGYIXEK. . ADLVIVGAEGVVENGGIINKIGTNQXAVCAKAQNKPFYVVAESFKFVRLFPLNQQD
Template Known Secondary structure  ............GGGGGG..
S

S
TTS
TTTT



GGGB
S


SSGGG
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   180......... 190.........200.........210.........220.........230.........240.....
 
   216...220.........230... ......240....
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Query Sequence  . . . . . . . . . . . . . . . . . . . PNVVCSLESVDKLITDAG. . IDPAFRQALEE
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Template Sequence  VPDKFKYKADGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIK
Template Known Secondary structure  S
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S
GGG
STT
GGG
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   246...250.........260.........270.........280.........290.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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