Job Description P15082 Confidence 94.14% Date Thu Jan 5 11:34:40 GMT 2012 Rank 237 Aligned Residues 133 % Identity 16% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.																													.	.	.	.	.	.								.	.	.
Query SS confidence																				.	.																													.	.	.	.	.	.								.	.	.
Query Sequence		M	K	P	R	Q	R	Q	A	A	I	L	E	Y	L	Q	K	Q	G	.	.	K	C	S	V	E	E	L	A	Q	Y	F	D	T	T	G	T	T	I	R	K	D	L	V	I	L	E	H	A	.	.	.	.	.	.	G	T	V	I	R	T	Y	.	.	.	G	G	V	V	L	N	K	E	E	S	D	P	P	I	D	H
Query Conservation																				.	.																													.	.	.	.	.	.								.	.	.
Alig confidence																				.	.																													.	.	.	.	.	.								.	.	.											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		F	R	R	S	G	R	L	V	D	L	T	N	Y	L	L	T	H	P	H	E	L	I	P	L	T	F	F	S	E	R	Y	E	S	A	K	S	S	I	S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	.	.	.	.	.	.
Template Known Secondary structure																	T	S	T	T			B									T	T																				T	T	S								S	T	T											.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.									100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																				.	.													.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																				.	.													.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		K	T	L	I	N	T	H	K	K	E	L	I	A	E	A	A	V	S	.	.	F	I	H	D	G	D	S	I	I	L	D	A	.	.	.	.	.	.	.	.	G	S	T	V	L	Q	M	V	P	L	L	S	R	F	N	N	.	.	.	I	T	V	M	T	N	S	L	H	I	V	N	A	L	S	E	L	D	N	E	Q
Query Conservation																				.	.													.	.	.	.	.	.	.	.																	.	.	.
Alig confidence		.																		.	.													.	.	.	.	.	.	.	.																	.	.	.
Template Conservation		.
Template Sequence		.	Q	A	E	A	E	E	F	V	Q	T	L	G	Q	S	L	A	N	P	E	R	I	L	P	G	G	Y	V	Y	L	T	D	I	L	G	K	P	S	V	L	S	K	V	G	K	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V	P
Template Known Secondary structure		.																T		G	G	G			T	T	T					T	T	T	T	T																T	T	T	S			S						T	T	T	T												T
Template Predicted Secondary structure		.
Template SS confidence
			77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		137	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions