 |
Job Description | P32162 | Confidence | 4.71% | Date | Thu Jan 5 11:49:42 GMT 2012 |
Rank | 33 | Aligned Residues | 29 |
% Identity | 24% | Template | c1yo4A_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:hypothetical protein x4; |
PDBTitle: solution structure of the sars coronavirus orf 7a coded x42 protein
|
Resolution | UNK |
|
  |   |
71 | . | . | . | . | . | . | |
|
|
. | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | Q | V | E | L | D | . |
. |
. |
A | A | F | T | F | S | C | . |
Q | A | E | M | I | I | F | E | L | S | L | R | S | L | A |
Query Conservation |   |
  |
|
|   |   |
|   | . | . | . |
|   |
|   |
|
|
| . |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
D | N | K | F | A | L | T | C | T | S | T | H | F | A | F | A | C | A | D | G | T | R | H | T | Y | Q | L | R | A | R | S | V | S |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |
|
| S |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|