Email l.a.kelley@imperial.ac.uk Description P76550 Date Thu Jan 5 12:24:27 GMT 2012 Unique Job ID d64fd265dc94e593

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2kpjA_ 94.8 27 PDB header:transcription regulator Chain: A: PDB Molecule:sos-response transcriptional repressor, lexa; PDBTitle: solution structure of protein sos-response transcriptional2 repressor, lexa from eubacterium rectale. northeast3 structural genomics consortium target err9a 2 c3op9A_ 92.8 14 PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua 3 d1llib_ 92.3 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 4 c3bs3A_ 91.9 20 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis 5 c3omtA_ 91.5 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae. 6 d1y7ya1 91.2 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 7 d1utxa_ 91.2 3 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 8 d2b5aa1 90.1 25 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 9 c3f52A_ 90.0 30 PDB header:transcription activator Chain: A: PDB Molecule:clp gene regulator (clgr); PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum 10 d1x57a1 89.9 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:EDF1-like 11 c3lisB_ 89.4 16 PDB header:transcription Chain: B: PDB Molecule:csp231i c protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.csp231i (monoclinic form) 12 c3ivpD_ 89.1 17 PDB header:dna binding protein Chain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630. 13 d1y9qa1 88.9 17 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Probable transcriptional regulator VC1968, N-terminal domain 14 d1adra_ 88.9 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 15 c3clcC_ 88.2 13 PDB header:transcription regulator/dna Chain: C: PDB Molecule:regulatory protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator 16 c3trbA_ 88.1 33 PDB header:dna binding protein Chain: A: PDB Molecule:virulence-associated protein i; PDBTitle: structure of an addiction module antidote protein of a higa (higa)2 family from coxiella burnetii 17 d2r1jl1 88.1 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 18 c2xcjB_ 87.9 26 PDB header:viral protein Chain: B: PDB Molecule:c protein; PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2 19 c2ebyA_ 87.9 17 PDB header:transcription Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; PDBTitle: crystal structure of a hypothetical protein from e. coli 20 c3r1fO_ 87.8 26 PDB header:transcription Chain: O: PDB Molecule:esx-1 secretion-associated regulator espr; PDBTitle: crystal structure of a key regulator of virulence in mycobacterium2 tuberculosis 21 d1lmb3_ not modelled 87.4 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 22 d1rioa_ not modelled 86.7 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 23 c2jvlA_ not modelled 86.6 20 PDB header:transcription Chain: A: PDB Molecule:trmbf1; PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei 24 c3cecA_ not modelled 86.3 17 PDB header:transcription Chain: A: PDB Molecule:putative antidote protein of plasmid maintenance system; PDBTitle: crystal structure of a putative antidote protein of plasmid2 maintenance system (npun_f2943) from nostoc punctiforme pcc 73102 at3 1.60 a resolution 25 c3mlfC_ not modelled 86.0 10 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: putative transcriptional regulator from staphylococcus aureus. 26 c3dnvB_ not modelled 85.9 10 PDB header:transcription/dna Chain: B: PDB Molecule:hth-type transcriptional regulator hipb; PDBTitle: mdt protein 27 c2ewtA_ not modelled 85.4 33 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of the dna-binding domain of bldd 28 d1b0na2 not modelled 84.0 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 29 c3bdnB_ not modelled 82.2 23 PDB header:transcription/dna Chain: B: PDB Molecule:lambda repressor; PDBTitle: crystal structure of the lambda repressor 30 c3eusB_ not modelled 80.6 10 PDB header:dna binding protein Chain: B: PDB Molecule:dna-binding protein; PDBTitle: the crystal structure of the dna binding protein from silicibacter2 pomeroyi 31 d2icta1 not modelled 80.3 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 32 c1b0nA_ not modelled 79.9 17 PDB header:transcription regulator Chain: A: PDB Molecule:protein (sinr protein); PDBTitle: sinr protein/sini protein complex 33 d2croa_ not modelled 79.4 10 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 34 d1sq8a_ not modelled 79.1 21 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 35 c3f6wE_ not modelled 78.0 17 PDB header:dna binding protein Chain: E: PDB Molecule:xre-family like protein; PDBTitle: xre-family like protein from pseudomonas syringae pv. tomato str.2 dc3000 36 c2ef8A_ not modelled 75.9 19 PDB header:transcription regulator Chain: A: PDB Molecule:putative transcription factor; PDBTitle: crystal structure of c.ecot38is 37 d1r69a_ not modelled 75.1 24 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 38 c3t76A_ not modelled 73.2 10 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator vanug; PDBTitle: crystal structure of transcriptional regulator vanug, form ii 39 c3b7hA_ not modelled 70.3 27 PDB header:structural protein Chain: A: PDB Molecule:prophage lp1 protein 11; PDBTitle: crystal structure of the prophage lp1 protein 11 40 c3kxaD_ not modelled 70.0 17 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of ngo0477 from neisseria gonorrhoeae 41 d2a6ca1 not modelled 68.3 20 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE1354 42 d2ofya1 not modelled 65.2 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 43 c2o38A_ not modelled 64.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: putative xre family transcriptional regulator 44 d2o38a1 not modelled 64.9 17 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE1354 45 c1y9qA_ not modelled 62.9 17 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae 46 d1r8ja1 not modelled 42.1 47 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 47 d1sv1a_ not modelled 38.9 53 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 48 d1v2za_ not modelled 38.3 53 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 49 c2bnoA_ not modelled 36.4 23 PDB header:oxidoreductase Chain: A: PDB Molecule:epoxidase; PDBTitle: the structure of hydroxypropylphosphonic acid epoxidase2 from s. wedmorenis. 50 d1r89a3 not modelled 33.3 78 Fold:Ferredoxin-like Superfamily:PAP/Archaeal CCA-adding enzyme, C-terminal domain Family:Archaeal tRNA CCA-adding enzyme 51 c2qfcB_ not modelled 28.2 18 PDB header:transcription regulation Chain: B: PDB Molecule:plcr protein; PDBTitle: crystal structure of bacillus thuringiensis plcr complexed with papr 52 c1r8jB_ not modelled 26.6 47 PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus 53 c2axzC_ not modelled 25.4 15 PDB header:transcription Chain: C: PDB Molecule:prgx; PDBTitle: crystal structure of prgx/ccf10 complex 54 d1e9ma_ not modelled 22.7 23 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 55 c3ci9B_ not modelled 22.1 50 PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 56 c2fjrB_ not modelled 17.5 17 PDB header:transcription regulator Chain: B: PDB Molecule:repressor protein ci; PDBTitle: crystal structure of bacteriophage 186 57 d1u04a2 not modelled 15.4 45 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:PIWI domain 58 d1fpoa2 not modelled 15.3 31 Fold:Open three-helical up-and-down bundle Superfamily:HSC20 (HSCB), C-terminal oligomerisation domain Family:HSC20 (HSCB), C-terminal oligomerisation domain 59 d1r5qa_ not modelled 14.1 50 Fold:KaiA/RbsU domain Superfamily:KaiA/RbsU domain Family:Circadian clock protein KaiA, C-terminal domain 60 d1xlqa1 not modelled 12.5 18 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 61 d2ebfx2 not modelled 11.0 41 Fold:EreA/ChaN-like Superfamily:EreA/ChaN-like Family:PMT domain-like 62 c3rylB_ not modelled 9.8 62 PDB header:protein binding Chain: B: PDB Molecule:protein vpa1370; PDBTitle: dimerization domain of vibrio parahemolyticus vopl 63 c2wlbB_ not modelled 9.2 13 PDB header:electron transport Chain: B: PDB Molecule:electron transfer protein 1, mitochondrial; PDBTitle: adrenodoxin-like ferredoxin etp1fd(516-618) of2 schizosaccharomyces pombe mitochondria 64 c2is8A_ not modelled 9.2 21 PDB header:structural protein Chain: A: PDB Molecule:molybdopterin biosynthesis enzyme, moab; PDBTitle: crystal structure of the molybdopterin biosynthesis enzyme moab2 (ttha0341) from thermus theromophilus hb8 65 d1sv6a_ not modelled 8.9 21 Fold:FAH Superfamily:FAH Family:FAH 66 d1hywa_ not modelled 8.7 47 Fold:gpW/XkdW-like Superfamily:Head-to-tail joining protein W, gpW Family:Head-to-tail joining protein W, gpW 67 d1b4ub_ not modelled 8.6 53 Fold:Phosphorylase/hydrolase-like Superfamily:LigB-like Family:LigB-like 68 c2zvnF_ not modelled 8.5 37 PDB header:signaling protein/transcription Chain: F: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group 69 d1grja1 not modelled 8.5 47 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 70 d1ejxb_ not modelled 7.9 38 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 71 c3swfA_ not modelled 7.7 30 PDB header:transport protein Chain: A: PDB Molecule:cgmp-gated cation channel alpha-1; PDBTitle: cnga1 621-690 containing clz domain 72 c2v4hA_ not modelled 7.7 37 PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex 73 c2ppxA_ not modelled 7.4 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1735; PDBTitle: crystal structure of a hth xre-family like protein from agrobacterium2 tumefaciens 74 d2ppxa1 not modelled 7.4 38 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 75 d1ob8a_ not modelled 7.4 24 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 76 c2re3A_ not modelled 7.3 40 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a duf1285 family protein (spo_0140) from2 silicibacter pomeroyi dss-3 at 2.50 a resolution 77 c2kddB_ not modelled 7.2 24 PDB header:cell cycle Chain: B: PDB Molecule:borealin; PDBTitle: solution structure of the conserved c-terminal dimerization2 domain of borealin 78 d4ubpb_ not modelled 6.9 34 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 79 c2ib1A_ not modelled 6.8 25 PDB header:apoptosis Chain: A: PDB Molecule:death domain containing membrane protein nradd; PDBTitle: solution structure of p45 death domain 80 d2bt6a1 not modelled 6.7 12 Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related 81 c3fmyA_ not modelled 6.6 13 PDB header:dna binding protein Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021) 82 c2w4sD_ not modelled 6.5 24 PDB header:structural protein Chain: D: PDB Molecule:ankyrin-repeat protein; PDBTitle: novel rna-binding domain in cryptosporidium parvum at 2.52 angstrom resolution 83 c2of5A_ not modelled 6.4 21 PDB header:apoptosis Chain: A: PDB Molecule:death domain-containing protein cradd; PDBTitle: oligomeric death domain complex 84 c3r3kA_ not modelled 6.3 54 PDB header:de novo protein Chain: A: PDB Molecule:cchex-phi22 helix; PDBTitle: crystal structure of a parallel 6-helix coiled coil 85 c3r3kB_ not modelled 6.3 54 PDB header:de novo protein Chain: B: PDB Molecule:cchex-phi22 helix; PDBTitle: crystal structure of a parallel 6-helix coiled coil 86 c3r3kC_ not modelled 6.3 54 PDB header:de novo protein Chain: C: PDB Molecule:cchex-phi22 helix; PDBTitle: crystal structure of a parallel 6-helix coiled coil 87 d1jwya1 not modelled 6.3 71 Fold:SH3-like barrel Superfamily:Myosin S1 fragment, N-terminal domain Family:Myosin S1 fragment, N-terminal domain 88 c3lxfC_ not modelled 6.1 29 PDB header:metal binding protein Chain: C: PDB Molecule:ferredoxin; PDBTitle: crystal structure of [2fe-2s] ferredoxin arx from novosphingobium2 aromaticivorans 89 d3bz7a1 not modelled 6.0 71 Fold:SH3-like barrel Superfamily:Myosin S1 fragment, N-terminal domain Family:Myosin S1 fragment, N-terminal domain 90 d1e9ya1 not modelled 6.0 28 Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit 91 d2f23a1 not modelled 6.0 35 Fold:Long alpha-hairpin Superfamily:GreA transcript cleavage protein, N-terminal domain Family:GreA transcript cleavage protein, N-terminal domain 92 c2yqfA_ not modelled 5.8 17 PDB header:protein binding Chain: A: PDB Molecule:ankyrin-1; PDBTitle: solution structure of the death domain of ankyrin-1 93 c1l8dB_ not modelled 5.7 38 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 94 c1r48A_ not modelled 5.5 54 PDB header:transport protein Chain: A: PDB Molecule:proline/betaine transporter; PDBTitle: solution structure of the c-terminal cytoplasmic domain2 residues 468-497 of escherichia coli protein prop 95 d2gf5a1 not modelled 5.5 21 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 96 c3ri2B_ not modelled 5.3 25 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, padr-like family; PDBTitle: crystal structure of padr family transcriptional regulator from2 eggerthella lenta dsm 2243 97 c1xmaA_ not modelled 5.2 14 PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulator; PDBTitle: structure of a transcriptional regulator from clostridium thermocellum2 cth-833 98 d1xmaa_ not modelled 5.2 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:PadR-like 99 d1jnda2 not modelled 5.1 38 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain