Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X9
Confidence24.67%DateThu Jan 5 11:11:39 GMT 2012
Rank80Aligned Residues65
% Identity12%Templated2asba1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50.........60.........
Predicted Secondary structure 








....

















Query SS confidence 
























. . . .









































Query Sequence  GKMTGIVKWFNADKGFGFITPDDGS. . . . KDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTS
Query Conservation   
  
 

     





      .... 


 
 
         
  
  
 
      

  
  
  
Alig confidence 
























....












..


























Template Conservation 




 
 
       
 
 



      




  



 ..
 
  





 
  
    


 
 
Template Sequence  EIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPG. . ESYEHGNRLRCYVVGVTRGAREPLITL
Template Known Secondary structure 


TT

SSSS

GGGS
TT..



TT


SSS
Template Predicted Secondary structure 

















..









Template SS confidence 






































































   113......120.........130.........140.........150.... .....160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions