Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X9
Confidence99.73%DateThu Jan 5 11:11:39 GMT 2012
Rank14Aligned Residues66
% Identity21%Templated1wfqa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70
Predicted Secondary structure 




























Query SS confidence 




































































Query Sequence  SGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
Query Conservation    
  
 

     





       


 
 
         
  
  
 
      

  
  
  
Alig confidence 











..























.





























Template Conservation    
  
 
  

..  



       




 
    .    
  

 
 
 
    
 

  

 

Template Sequence  ALRETGVIEKLL. . TSYGFIQCSERQARLFFHCSQYNG. NLQDLKVGDDVEFEVSSDRRTGKPIAVKLV
Template Known Secondary structure 


..SSTTTTTTT
SS.
TTT

TT


SSS

Template Predicted Secondary structure 
..










.














Template SS confidence 




































































   16...20....... ..30.........40.........50. ........60.........70.........80.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions