Job Description P0A9X9 Confidence 30.27% Date Thu Jan 5 11:11:39 GMT 2012 Rank 72 Aligned Residues 49 % Identity 20% Template c1nt9G_ PDB info PDB header:transcription, transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide; PDBTitle: complete 12-subunit rna polymerase ii Resolution 4.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	M	T	G	I	V	K	W	F	N	A	D	K	G	F	G	F	I	T	P	D	D	G	S	K	D	V	F	V	H	F	S	A	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	G	Y	K	S	L	D	E	G	Q	K	V	S	F	T	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.			.					.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.			.					.	.
Template Sequence		E	V	V	D	G	T	V	V	S	C	S	Q	H	.	G	F	.	E	V	Q	V	.	.	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I
Template Known Secondary structure													T	T	.			.					.	.	S	S	S						T	T	T	S	S	S	S				B	T	T					S	S	S						S	S
Template Predicted Secondary structure															.			.					.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.		.	.		100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions