Job Description P0A8Y5 Confidence 99.79% Date Thu Jan 5 11:08:59 GMT 2012 Rank 43 Aligned Residues 194 % Identity 16% Template c3m1yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase (serb); PDBTitle: crystal structure of a phosphoserine phosphatase (serb) from2 helicobacter pylori Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	I	K	L	I	A	I	D	M	D	G	T	L	L	L	P	D	H	T	I	S	P	A	V	K	N	A	I	A	A	A	R	A	R	G	V	N	V	V	L	T	T	G	R	P	Y	A	G	V	H	N	Y	L	K	E	L	H	M	E	Q	P	G	D	Y	C	I	T	Y	N	G	A	L	V	Q	K	A	A	D	G
Query Conservation
Alig confidence				.																.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	.	K	L	A	V	F	D	F	D	S	T	L	V	N	A	E	.	.	.	.	.	.	T	I	E	S	L	A	R	A	W	G	V	F	D	E	V	K	T	I	T	L	K	E	T	D	F	H	K	S	L	I	L	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.								B	T	T	T	B	S	S		.	.	.	.	.	.									T	T						T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	V	A	Q	T	A	L	S	Y	D	D	Y	R	F	L	E	K	L	S	R	E	V	G	S	H	F	H	A	L	D	R	T	T	L	Y	T	A	N	R	D	I	S	Y	Y	T	V	H	E	S	F	V	A	T	I	P	L	V	F	C	E	A	E	K	M	D	P	N	T	Q	F	L	K	V	M	M	I	D	E	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	L	K	N	X	P	L	K	L	A	K	E	V	C	E	S	L	P	L	F	E	G	A	L	E	L	V	S	A	L	K	E	K	N	Y	K	V	V	C	F	S	G	G	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T		B									T	T			B		B	T										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		A	I	L	D	Q	A	I	A	R	I	P	Q	E	V	K	E	K	Y	T	V	L	K	S	A	P	Y	F	.	.	.	.	.	L	E	I	L	D	K	R	V	N	K	G	T	G	V	K	S	L	A	D	V	L	G	I	K	P	E	E	I	M	A	I	G	D	Q	E	N	D	I	A	M	I	E	Y	A	G	V	G	V
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		D	L	A	T	N	H	Y	R	D	L	L	H	L	D	A	A	F	S	N	T	L	I	V	E	N	D	A	L	N	G	L	V	T	G	H	X	X	F	S	H	S	K	G	E	X	L	L	V	L	Q	R	L	L	N	I	S	K	T	N	T	L	V	V	G	D	G	A	N	D	L	S	X	F	K	H	A	H	I	K	I
Template Known Secondary structure													T		S											T	T									S			S	T	T														T			S	T	T							S	G	G	G					T	T		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	D	N	A	I	P	S	V	K	E	V	A	N	F	V	T	K	S	N	L	E	D	G	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		A	F	.	N	A	K	E	V	L	K	Q	H	A	T	H	C	I	N	E	P	D	L	A	L	I
Template Known Secondary structure				.	S							T	T		S					S	S	B	G	G	G	G
Template Predicted Secondary structure				.
Template SS confidence
		180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions