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Job DescriptionP0A8Y5
Confidence99.83%DateThu Jan 5 11:08:59 GMT 2012
Rank40Aligned Residues135
% Identity32%Templatec2iyeC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:copper-transporting atpase; PDBTitle: structure of catalytic cpx-atpase domain copb-b
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20
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Query Sequence  AIKLIAIDMDGTLLLPDHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EIDTIIFDKTGTLTYGTPIVTQFIGDSLSLAYAASVEALSSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGKISDK
Template Known Secondary structure  T

STTTTS
TT

STT





TTTTT
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   409410.........420.........430.........440.........450.........460.........470.........480........
 
   21........30.........40.........50.........60.........70...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . ISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGAL
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Template Sequence  IIEVKKAEDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEY. . . . . . . . . . .
Template Known Secondary structure 



TT
S

GGG

SS
T
S
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   489490.........500.........510.........520.........530.........540.........550.......
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  VQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  VMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADV
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S

TT


STTTSS
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   561........570.........580.........590.........600.
 
   234.....240.........250.........260......
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Query Sequence  GVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEK
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Template Sequence  SVAMGNGVDISKNVADIILVSNDIGTLLGLIKN
Template Known Secondary structure  STTT
STT

SSTT

T
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   602.......610.........620.........630....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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