Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8Y5
Confidence98.28%DateThu Jan 5 11:08:59 GMT 2012
Rank125Aligned Residues195
% Identity16%Templatec2i6xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGST
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Template Sequence  IRNIVFDLGGVLIHLN. . . . . . . . . . . . . . . . . . . . . . . . . . . . REESIRRFKAIGV. . . . . . . . . . . ADIEEXLDPKGL
Template Known Secondary structure 
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SBTTT
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   2.......10....... ..20.........30 .........40..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  VAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAI
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Template Sequence  FLDLESGRKSEEEFRTEL. . . . . . . . . . . SRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTNPYV
Template Known Secondary structure  SSS
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GGG
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   46...50.........60... ......70.........80.........90.........100.........110....
 
   163......170.........180.........190.........200.........210.........220.........230... ......240.
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Query Sequence  LDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV. GVAMDNAI
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Template Sequence  LDLAXSPRFLPSGRTLDSFFDKVYASCQXGKYKPNEDIFLEXIADSGXKPEETLFIDDGPANVATAERLGFHTYCPDNGE
Template Known Secondary structure  TSTTSSTT


GGGGSST

TTS


GGG
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TT
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   242.....
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Query Sequence  PSVKEV
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Template Sequence  NWIPAI
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   195....200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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