Job Description P31129 Confidence 100.00% Date Thu Jan 5 11:47:13 GMT 2012 Rank 5 Aligned Residues 160 % Identity 35% Template c3ignA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a Resolution 1.83 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		I	R	S	N	M	D	V	L	T	G	L	P	G	R	R	V	L	D	E	S	F	D	H	Q	L	R	N	A	.	.	E	P	L	N	L	Y	L	M	L	L	D	I	D	R	F	K	L	V	N	D	T	Y	G	H	L	I	G	D	V	V	L	R	T	L	A	T	Y	L	A	S	W	T	R	D	Y	E	T	V	Y	R
Query Conservation																														.	.
Alig confidence																														.	.
Template Conservation
Template Sequence		K	L	S	X	T	D	R	L	T	G	L	L	N	R	G	T	W	E	N	L	V	D	A	E	Y	E	R	F	R	R	Y	G	Q	A	T	S	L	V	X	F	D	I	D	H	F	K	P	V	N	D	T	Y	G	H	L	A	G	D	E	V	I	R	H	T	A	D	V	T	R	N	N	I	R	Q	S	D	S	A	G	R
Template Known Secondary structure		T	T	S	S	B		T	T	T		S																																T	T																										T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		Y	G	G	E	E	F	I	I	I	V	K	A	A	N	D	E	E	A	C	R	A	G	V	R	I	C	Q	L	V	D	N	H	A	I	T	H	S	E	G	H	I	N	I	T	V	T	A	G	V	S	R	A	F	.	P	E	E	P	L	D	V	V	I	G	R	A	D	R	A	M	Y	E	G	K	Q	T	G	R	N	R
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		Y	G	G	E	E	F	G	I	I	L	P	E	T	D	A	E	S	A	R	V	I	C	E	R	I	R	E	A	I	E	K	S	T	V	S	T	S	A	G	D	I	Q	Y	T	V	S	X	G	I	A	Q	L	T	E	T	P	E	N	Y	X	Q	W	X	Q	K	A	D	E	A	L	Y	K	A	K	E	S	G	R	N	K
Template Known Secondary structure			S	S	S								T																			T						S	S																S			S	S																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		284	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		313	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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