Job Description P31129 Confidence 100.00% Date Thu Jan 5 11:47:13 GMT 2012 Rank 2 Aligned Residues 255 % Identity 20% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	W	L	V	S	M	F	H	S	V	V	A	R	D	A	S	K	P	E	I	T	D	N	H	S	Y	G	L	C	Q	F	G	R	W	I	D	H	L	G	P	L	D	N	D	E	L	P	Y	V	R	L	M	D	S	A	H	Q	H	M	H	N	C	G	R	E	L	M	L	A	I	V	E	N	H	W	Q	D	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	T	L	E	E	L	E	X	I	G	K	S	I	D	E	Q	V	E	R	Y	T	E	A	P	S	S	E	A	A	C	L	L	G	F	R	L	Q	L	Y	L	L	H	P	A	F	A	S	L	C	R	L	T	R	D	A	S	E	D	L	P	D	I	G	Y	G	R	Y	L	R	R	F	I	D	G	I	G	S	C	G
Template Known Secondary structure																									S																	T	T																																	T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		F	D	A	F	Q	E	G	L	L	S	F	T	A	A	L	T	D	Y	K	I	Y	L	L	T	I	R	S	N	M	D	V	L	T	G	L	P	G	R	R	V	L	D	E	S	F	D	H	Q	L	R	N	A	.	.	E	P	L	N	L	Y	L	M	L	L	D	I	D	R	F	K	L	V	N	D	T	Y	G	H	L	I
Query Conservation																																																						.	.
Alig confidence																																																						.	.																						.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	A	T	A	E	T	E	L	L	G	E	A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.
Template Known Secondary structure																														B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		G	D	V	V	L	R	T	L	A	T	Y	L	A	S	W	T	R	D	Y	E	T	V	Y	R	Y	G	G	E	E	F	I	I	I	V	K	A	A	N	D	E	E	A	C	R	A	G	V	R	I	C	Q	L	V	D	N	H	A	I	T	H	S	E	G	H	I	N	I	T	V	T	A	G	V	S	R	.	.	.	A	F
Query Conservation																																																																													.	.	.
Alig confidence																																																												.	.	.	.														.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		G	D	R	I	L	Q	L	V	A	E	T	I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	S	A	.	.	.	.	R	X	V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G	T
Template Known Secondary structure																T			T	T							S	S	S							S	S																					T	T	.	.	.	.	T	T																S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		258		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	E	E	P	L	D	V	V	I	G	R	A	D	R	A	M	Y	E	G	K	Q	T	G	R	N	R	C	M	F
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		D	V	D	G	G	I	E	E	L	V	R	L	A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure																								S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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