Job Description P31129 Confidence 24.46% Date Thu Jan 5 11:47:13 GMT 2012 Rank 41 Aligned Residues 66 % Identity 17% Template c2oh2B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna polymerase kappa; PDBTitle: ternary complex of human dna polymerase Resolution 3.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	I	G	D	V	V	L	R	T	L	A	T	Y	L	A	S	W	T	R	D	Y	E	T	V	Y	R	Y	G	G	E	E	F	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	K	A	A	N	D	E	E	A	C	R	A	G	V	R	I	C	Q	L	V	D	N	H
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		F	D	K	Y	R	A	V	S	K	E	V	K	E	I	L	A	D	Y	D	P	N	.	.	.	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	K
Template Known Secondary structure																					T	T	.	.	.			B		S	S	S						T								T	S			T	T	T	S	B								B			S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	H	S	E	G	H	I	N	I	T	V	T	A	G	V	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	T	T	L	T	A	S	A	G	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										305	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions