Job Description P31129 Confidence 100.00% Date Thu Jan 5 11:47:13 GMT 2012 Rank 1 Aligned Residues 189 % Identity 31% Template c1w25B_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp Resolution 2.70 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		H	F	D	A	F	Q	E	G	L	L	S	F	T	A	A	L	T	D	Y	K	I	Y	L	L	T	I	R	S	N	M	D	V	L	T	G	L	P	G	R	R	V	L	D	E	S	F	D	H	Q	L	R	N	A	.	.	E	P	L	N	L	Y	L	M	L	L	D	I	D	R	F	K	L	V	N	D	T	Y	G	H	L
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		S	A	R	V	K	T	Q	I	Q	R	K	R	Y	T	D	Y	L	R	N	N	L	D	H	S	L	E	L	A	V	T	D	Q	L	T	G	L	H	N	R	R	Y	M	T	G	Q	L	D	S	L	V	K	R	A	T	L	G	G	D	P	V	S	A	L	L	I	D	I	D	F	F	K	K	I	N	D	T	F	G	H	D
Template Known Secondary structure																				S	S	S	S			S	T	T			B		T	T	T		S	B																		T	S	S											T	T								S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		I	G	D	V	V	L	R	T	L	A	T	Y	L	A	S	W	T	R	D	Y	E	T	V	Y	R	Y	G	G	E	E	F	I	I	I	V	K	A	A	N	D	E	E	A	C	R	A	G	V	R	I	C	Q	L	V	D	N	H	A	I	T	H	S	E	.	.	G	H	I	N	I	T	V	T	A	G	V	S	R	A	F
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		I	G	D	E	V	L	R	E	F	A	L	R	L	A	S	N	V	R	A	I	D	L	P	C	R	Y	G	G	E	E	F	V	V	I	M	P	D	T	A	L	A	D	A	L	R	I	A	E	R	I	R	M	H	V	S	G	S	P	F	T	V	A	H	G	R	E	M	L	N	V	T	I	S	I	G	V	S	A	T	A
Template Known Secondary structure																	T	S		T	T	S						S	S	S							T	T																			S	S					S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
			258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	E	E	P	L	D	V	V	I	G	R	A	D	R	A	M	Y	E	G	K	Q	T	G	R	N	R	C	M	F	I	D	E	Q
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	E	G	D	T	P	E	A	L	L	K	R	A	D	E	G	V	Y	Q	A	K	A	S	G	R	N	A	V	V	G	K	A	A	H
Template Known Secondary structure		S	T	T																				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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