Job Description P29018 Confidence 99.97% Date Thu Jan 5 11:45:34 GMT 2012 Rank 58 Aligned Residues 318 % Identity 14% Template d3b60a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.70

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	R	W	L	K	Q	Q	S	V	I	S	Q	R	W	L	N	I	S	R	L	L	G	F	V	S	G	I	L	I	I	A	Q	A	W	F	M	A	R	I	L	Q	H	M	I	M	E	N	I	P	R	E	A	L	L	L	P	F	T	L	L	V	L	T	F	V	L	R	A	W	V	V	W	L	R	E	R	V	G
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		Q	T	F	R	R	L	W	P	T	I	A	P	F	K	A	G	L	I	V	A	G	I	A	L	I	L	N	A	A	S	D	T	F	M	L	S	L	L	K	P	L	L	D	D	G	F	G	K	T	.	D	R	S	V	L	L	W	M	P	L	V	V	I	G	L	M	I	L	R	G	I	T	S	Y	I	S	S	Y	C	I
Template Known Secondary structure												G	G	G																										T					S	S	T	T	S	T	.	T							S
Template Predicted Secondary structure																																																			.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	A	G	Q	H	I	R	F	A	I	R	R	Q	V	L	D	R	L	Q	Q	A	G	P	A	W	I	Q	G	K	P	A	G	S	W	A	T	L	V	L	E	Q	I	D	D	M	H	D	Y	Y	A	R	Y	L	P	Q	M	A	L	A	V	S	V	P	L	L	I	V	V	A	I	F	P	S	N	W	A	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	V	S	G	K	V	V	M	T	M	R	R	R	L	F	G	H	M	M	G	M	P	V	A	F	F	D	K	Q	S	T	G	T	L	L	S	R	I	T	Y	D	S	E	Q	V	A	S	S	S	S	G	A	L	I	T	V	V	R	E	G	A	S	I	I	G	L	F	I	M	M	F	Y	Y	S	W	Q	L	S	I
Template Known Secondary structure																						T			S	T					S																																													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	G	T	A	P	L	I	P	L	F	M	A	L	V	G	M	G	A	A	D	A	N	R	R	N	F	L	A	L	A	R	L	S	G	H	F	L	D	R	L	R	G	M	E	T	L	R	I	F	G	R	G	E	A	E	I	E	S	I	R	S	A	S	E	D	F	R	Q	R	T	M	E	V	L	R	L	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	V	V	L	A	P	I	V	S	I	A	I	R	V	V	S	K	R	F	R	S	I	S	K	N	M	Q	N	T	M	G	Q	V	T	T	S	A	E	Q	M	L	K	G	H	K	E	V	L	I	F	G	G	Q	E	V	E	T	K	R	F	D	K	V	S	N	K	M	R	L	Q	G	M	K	M	V	S	A	S	S
Template Known Secondary structure																																													T								T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	S	G	I	L	E	F	F	T	S	L	S	I	A	L	V	A	V	Y	F	G	F	S	Y	L	G	E	L	D	F	G	H	Y	D	T	G	V	T	L	A	A	G	F	L	A	L	I	L	A	P	E	F	F	Q	P	L	R	D	L	G	T	F	Y	H	A	K	A	Q	A	V	G	A	A	D	S	L	K	T	F
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.
Template Sequence		I	S	D	P	I	I	Q	L	I	A	S	L	A	L	A	F	V	L	Y	A	A	S	F	P	S	.	.	.	.	.	.	.	.	V	M	D	S	L	T	A	G	T	I	T	V	V	F	S	S	M	I	A	L	M	R	P	L	K	S	L	T	N	V	N	A	Q	F	Q	R	G	M	A	A	C	Q	T	L	F	A	I
Template Known Secondary structure																								S	S	S	.	.	.	.	.	.	.	.	T	T	S	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.									.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		328	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	T	P	L	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	S	E	Q	E	K
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions