Return to main results Retrieve Phyre Job Id

Job DescriptionP29018
Confidence97.17%DateThu Jan 5 11:45:34 GMT 2012
Rank101Aligned Residues140
% Identity19%Templated1tf7a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380.........390....... ..400.........410.........420.........430.........440.........450
Predicted Secondary structure 











..
































Query SS confidence 
























. .




















































Query Sequence  LPAGQRAVLVGRSGSGKSSLLNALS. . GFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
Query Conservation 
  
    
 
 







   
 ..
     
 
                  
  
 
   

  

 


  
    
Alig confidence 
























..














...















...................
Template Conservation 
  
 
  
 
  




 
   
           

    
...     
          ...................
Template Sequence  LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFE. . . ETPQDIIKNARSFGWD. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSSTTSS


SS...S
GGGT

...................
Template Predicted Secondary structure 













...





...................
Template SS confidence 















































































   36...40.........50.........60.........70....... ..80.........90...
 
   451........460.........470.........480.........490.........500.........510...... ...520......
Predicted Secondary structure 























....
Query SS confidence 

































































. . . .









Query Sequence  SEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASL. . . . DAHSEQRVME
Query Conservation               
   
  
  

 
 
   
  








 




     





 

 
....
      
  
Alig confidence  ........

























































....









Template Conservation  ........                                               
 


                    
Template Sequence  . . . . . . . . LAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELF
Template Known Secondary structure  ........TTS



SS

S

SST
S
STTTSTTT

Template Predicted Secondary structure  ........
























Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.....
 
   527..530... ......540..
Predicted Secondary structure 
..



Query SS confidence 






. .








Query Sequence  ALNAASL. . RQTTLMVTH
Query Conservation   
     ..  


 


Alig confidence 






..








Template Conservation   
          

 
 
Template Sequence  RLVARLKQIGATTVMTTE
Template Known Secondary structure  T
Template Predicted Secondary structure 


Template SS confidence 

















   166...170.........180...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions